Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815107.1_cds_XP_016498171.1_12229
CDS Infomation

[gene=LOC107816938] [db_xref=GeneID:107816938] [protein=isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial-like] [protein_id=XP_016498171.1] [location=complement(join(489..635,724..758,900..1015,1106..1174,1332..1435,1545..1633,1742..1843,1922..1975,2536..2665,2859..2865,3181..3290,3434..3477,3572..3821))] [gbkey=CDS]
Sequence

ATGCTCACCGCTCGACTCAGACTCCGGTCTTCCGCCATGGCTGGTGTTGCTTCTTTTATC
TCATCTTCATCGGCTTCAACATCATCCGCAGTTTCCAAAAACCTTTCTTTTCCAACCATT
TCCAATCGGCAGCTGTTCAAGAGCCGTGTTTATCTTCCCCACCGAATCCCCAATGCTTCA
ATTCGATGCTTCGCTTCCACTACAGCTTCGTCTAAAATCCGCGTTGAAAATCCTATTGTT
GAAATGGACGGCGATGAAATGACGAGGGTTATATGGACAATGATCAAAGACAAGCTAATA
TATCCTTATCTAGAGTTGGATACGAAGTATTACGATTTGGGGATATTGAACCGTGATGCC
ACTGACGATCAAGTTACTGTTGAAAGTGCCGAGGCTACACTTAAGTATAATGTGGCAAAC
TGCATTGCAACACTTTCTCATTTACCTACTTTTGATGTTTCAGATGAGACCAGAGTCAAG
GAATTTGGGCTGAAGTCTATGTGGAGAAGTCCCAATGGCACAATCAGAAACATTTTAAAT
GGTACTGTTTTCCGGGAGCCTATATTATGCAAGAACGTCCCCAGAATTGTTCCTGGTTGG
AAGAAACCCATTTGTATTGGTAGGCATGCTTTTGGTGACCAGTATCGTGCCACAGATGCA
ATTATTAATGGGCCAGGAAAGCTTAAAATGGTTTTTGAGCCAGAAAATGGGGAAGCCCCT
ACGGAACTGGATGTTTATGATTTTAAAGGTCCAGGTGTTGCACTTGCCATGTACAATGTT
GACCAGTCAATTCGAGCGTTTGCTGAATCATCAATGTCAATGGCGTTTTCGAAGAAATGG
CCTCTATACTTGAGTACAAAAAATACAATTTTAAAGAAATACGATGGAAGGTTTAAGGAC
ATTTTTGAAGAGGTATATGAAGAGAAGTGGAAGCAACAGTTTGAGGAACACTCGATATGG
TATGAGCATAGATTGATAGACGACATGGTAGCTTATGCATTAAAAAGCGAGGGTGGATAT
GTTTGGGCATGCAAGAACTATGATGGAGATGTCCAGAGTGATCTGCTCGCTCAAGGATTT
GGTTCTCTGGGCCTCATGACCTCTGTATTGTTATCTTCTGATGGTAAGACATTAGAAGCT
GAAGCAGCCCATGGCACAGTAACCAGACATTTTCGGCTGCATCAAAAGGGTCAAGAAACA
AGTACAAACAGTGTTGCTTCTATTTTTGCATGGACAAGGGGACTTGGACATAGGTGA

Peptide Sequence

PEP ID

XP_016498171.1
PEP Infomation

PREDICTED: isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial-like [Nicotiana tabacum]
Sequence

MLTARLRLRSSAMAGVASFISSSSASTSSAVSKNLSFPTISNRQLFKSRVYLPHRIPNAS
IRCFASTTASSKIRVENPIVEMDGDEMTRVIWTMIKDKLIYPYLELDTKYYDLGILNRDA
TDDQVTVESAEATLKYNVANCIATLSHLPTFDVSDETRVKEFGLKSMWRSPNGTIRNILN
GTVFREPILCKNVPRIVPGWKKPICIGRHAFGDQYRATDAIINGPGKLKMVFEPENGEAP
TELDVYDFKGPGVALAMYNVDQSIRAFAESSMSMAFSKKWPLYLSTKNTILKKYDGRFKD
IFEEVYEEKWKQQFEEHSIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDLLAQGF
GSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFRLHQKGQETSTNSVASIFAWTRGLGHR

Transcript Sequence

Gene sequence data has not been registered.